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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06896.1Hypothetical protein. (689 aa)    
Predicted Functional Partners:
EAQ06897.1
Hypothetical protein.
 
     0.925
EAQ06898.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.924
EAQ06899.1
ATPase, MoxR family; COG0714 MoxR-like ATPases.
 
     0.849
EAQ06737.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.772
EAQ06901.1
COG3816 Uncharacterized protein conserved in bacteria.
 
     0.727
EAQ07040.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.608
EAQ07385.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.507
EAQ08128.1
COG3741 N-formylglutamate amidohydrolase.
  
     0.486
EAQ06730.1
COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis.
  
     0.483
EAQ07140.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.473
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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