STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06899.1ATPase, MoxR family; COG0714 MoxR-like ATPases. (335 aa)    
Predicted Functional Partners:
EAQ06898.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
 0.985
EAQ06897.1
Hypothetical protein.
 
     0.916
EAQ07888.1
Predicted Orn/Lys/Arg decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases.
   
 
 0.892
EAQ06896.1
Hypothetical protein.
 
     0.849
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
  
 
 0.765
EAQ06901.1
COG3816 Uncharacterized protein conserved in bacteria.
 
     0.757
EAQ06902.1
Hypothetical protein.
       0.414
EAQ07383.1
Chaperonin clpA/B; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
   
  
 0.408
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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