Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06919.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
EAQ05929.1
Lipoprotein, putative; COG0419 ATPase involved in DNA repair.
  
     0.739
EAQ06211.1
Hypothetical protein.
  
     0.730
EAQ06918.1
COG1538 Outer membrane protein.
       0.725
EAQ06508.1
Hypothetical protein.
  
     0.723
EAQ07109.1
Hypothetical protein.
  
     0.716
EAQ07919.1
Hypothetical protein.
  
     0.698
EAQ07858.1
Hypothetical protein.
  
     0.693
EAQ05749.1
Lipoprotein, putative; COG0797 Lipoproteins.
  
     0.676
EAQ07108.1
Hypothetical protein.
  
     0.664
EAQ06917.1
COG2518 Protein-L-isoaspartate carboxylmethyltransferase.
       0.649
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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