Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06930.1Thioesterase family protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (161 aa)    
Predicted Functional Partners:
EAQ05467.1
COG2124 Cytochrome P450.
 
 
  0.795
EAQ06931.1
COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.775
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
  0.743
EAQ08131.1
phenylacetate-CoA ligase, putative; COG1541 Coenzyme F390 synthetase.
 
 
 0.615
EAQ08047.1
Hypothetical protein.
  
     0.505
EAQ06932.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.475
EAQ07547.1
Hypothetical protein.
  
     0.457
plsX
Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.454
EAQ05324.1
N-carbamyl-D-amino acid amidohydrolase; COG0388 Predicted amidohydrolase.
    
  0.450
EAQ08133.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
    0.435
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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