Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06941.1CbiM protein; COG0310 ABC-type Co2+ transport system, permease component. (211 aa)    
Predicted Functional Partners:
EAQ06940.1
Hypothetical protein; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.999
EAQ06939.1
COG1122 ABC-type cobalt transport system, ATPase component.
 
 
 0.995
EAQ06942.1
Hypothetical protein.
 
  
  0.961
EAQ06943.1
Hypothetical protein; COG0260 Leucyl aminopeptidase.
 
     0.950
EAQ08049.1
Precorrin-3B C17-methyltransferase region; COG2073 Cobalamin biosynthesis protein CbiG.
  
  
 0.912
EAQ08051.1
CobL, precorrin-6Y C5,15-methyltransferase; COG2241 Precorrin-6B methylase 1.
  
 
 0.658
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.632
EAQ07266.1
Siroheme synthetase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.621
EAQ06360.1
Hypothetical protein; COG5266 ABC-type Co2+ transport system, periplasmic component.
    
 0.564
EAQ08052.1
precorrin-8X methylmutase; COG2082 Precorrin isomerase.
  
 
 0.514
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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