STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05196.1Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins. (403 aa)    
Predicted Functional Partners:
EAQ05345.1
COG1538 Outer membrane protein.
  
    0.537
EAQ05346.1
ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.516
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
  
 0.434
EAQ07421.1
Flagellar motor switch FliN protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.420
EAQ07447.1
Flagellar scaffolding protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
   0.403
EAQ05237.1
Hypothetical protein.
   
   0.401
EAQ05238.1
Hypothetical protein.
   
   0.401
EAQ05309.1
Hypothetical protein; COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
  0.401
EAQ05981.1
Site-specific recombinase, phage integrase family; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.401
EAQ06005.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  0.401
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.