STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33703.1COG3547 Transposase and inactivated derivatives. (353 aa)    
Predicted Functional Partners:
EAQ34237.1
COG3547 Transposase and inactivated derivatives.
  
     0.752
EAQ33834.1
COG3547 Transposase and inactivated derivatives.
  
     0.751
EAQ34257.1
COG3547 Transposase and inactivated derivatives.
  
     0.735
EAQ34255.1
COG3547 Transposase and inactivated derivatives.
  
     0.572
EAQ34236.1
COG3547 Transposase and inactivated derivatives.
  
     0.559
EAQ33833.1
COG3547 Transposase and inactivated derivatives.
  
     0.558
EAQ36496.1
Hypothetical protein; COG3547 Transposase and inactivated derivatives.
  
     0.499
EAQ33701.1
ISSod10, transposase OrfB; COG3335 Transposase and inactivated derivatives.
       0.406
EAQ33702.1
ISSod10, transposase OrfA; COG3415 Transposase and inactivated derivatives.
       0.406
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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