STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33948.1Cation-transporting ATPase; COG1285 Uncharacterized membrane protein. (236 aa)    
Predicted Functional Partners:
EAQ33740.1
Hypothetical protein.
  
  
 0.817
EAQ34435.1
Flagellar biosynthesis protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.786
EAQ33777.1
Putative cation-transporting P-type ATPase; COG0474 Cation transport ATPase.
  
 
 0.679
EAQ36009.1
COG0474 Cation transport ATPase.
  
 
 0.679
EAQ33949.1
ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.
       0.551
EAQ35262.1
COG3652 Predicted outer membrane protein.
  
    0.532
EAQ35681.1
Alpha amylase; COG0366 Glycosidases.
  
    0.477
EAQ36101.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
   
  
 0.447
ftsH
Peptidase M41, FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.417
atpB
ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.413
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.