Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ36980.1 | EAQ36981.1 | NB311A_07518 | NB311A_07523 | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | Histidine kinase; COG0642 Signal transduction histidine kinase. | 0.971 |
EAQ36980.1 | EAQ36982.1 | NB311A_07518 | NB311A_07528 | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | COG3293 Transposase and inactivated derivatives. | 0.539 |
EAQ36980.1 | EAQ36983.1 | NB311A_07518 | NB311A_07533 | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | 0.539 |
EAQ36981.1 | EAQ36980.1 | NB311A_07523 | NB311A_07518 | Histidine kinase; COG0642 Signal transduction histidine kinase. | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | 0.971 |
EAQ36981.1 | EAQ36982.1 | NB311A_07523 | NB311A_07528 | Histidine kinase; COG0642 Signal transduction histidine kinase. | COG3293 Transposase and inactivated derivatives. | 0.773 |
EAQ36981.1 | EAQ36983.1 | NB311A_07523 | NB311A_07533 | Histidine kinase; COG0642 Signal transduction histidine kinase. | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | 0.773 |
EAQ36982.1 | EAQ36980.1 | NB311A_07528 | NB311A_07518 | COG3293 Transposase and inactivated derivatives. | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | 0.539 |
EAQ36982.1 | EAQ36981.1 | NB311A_07528 | NB311A_07523 | COG3293 Transposase and inactivated derivatives. | Histidine kinase; COG0642 Signal transduction histidine kinase. | 0.773 |
EAQ36982.1 | EAQ36983.1 | NB311A_07528 | NB311A_07533 | COG3293 Transposase and inactivated derivatives. | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | 0.823 |
EAQ36983.1 | EAQ36980.1 | NB311A_07533 | NB311A_07518 | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | Helix-turn-helix, Fis-type protein; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. | 0.539 |
EAQ36983.1 | EAQ36981.1 | NB311A_07533 | NB311A_07523 | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | Histidine kinase; COG0642 Signal transduction histidine kinase. | 0.773 |
EAQ36983.1 | EAQ36982.1 | NB311A_07533 | NB311A_07528 | ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives. | COG3293 Transposase and inactivated derivatives. | 0.823 |