STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ33963.1COG2180 Nitrate reductase delta subunit. (325 aa)    
Predicted Functional Partners:
EAQ33968.1
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.995
EAQ34378.1
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.993
EAQ33962.1
COG2181 Nitrate reductase gamma subunit.
 
  
 0.992
EAQ33964.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.990
EAQ33965.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.988
EAQ34946.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.983
EAQ33961.1
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
 
  
 0.900
EAQ36645.1
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
 
  
 0.843
EAQ34794.1
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
 
  
 0.835
EAQ36751.1
Uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
    0.833
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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