STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ34145.1COG3436 Transposase and inactivated derivatives. (281 aa)    
Predicted Functional Partners:
EAQ33459.1
COG3436 Transposase and inactivated derivatives.
 
     0.955
EAQ35221.1
COG3436 Transposase and inactivated derivatives.
 
    
0.884
EAQ33658.1
COG3547 Transposase and inactivated derivatives.
 
     0.772
EAQ34144.1
70 kDa peroxisomal membrane protein; COG3436 Transposase and inactivated derivatives.
 
     0.737
EAQ34143.1
Hypothetical protein.
       0.568
EAQ34227.1
COG3436 Transposase and inactivated derivatives.
  
     0.526
EAQ34202.1
COG3436 Transposase and inactivated derivatives.
  
     0.492
EAQ34220.1
COG3436 Transposase and inactivated derivatives.
  
     0.492
EAQ34260.1
COG3436 Transposase and inactivated derivatives.
  
     0.492
EAQ33989.1
COG3436 Transposase and inactivated derivatives.
  
     0.492
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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