STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ34942.1COG4618 ABC-type protease/lipase transport system, ATPase and permease components. (668 aa)    
Predicted Functional Partners:
EAQ34941.1
COG5651 PPE-repeat proteins.
 
     0.909
EAQ34943.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
  
 0.909
EAQ34939.1
Hypothetical protein.
 
     0.784
EAQ34940.1
Hypothetical protein.
 
     0.771
pstB
Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.736
EAQ37393.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
  
 0.717
EAQ37397.1
Hemolysin-type calcium-binding region protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.667
EAQ36516.1
Secreted hemolysin-type calcium-binding bacteriocin, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.606
EAQ36490.1
Outer membrane secretion protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 0.530
EAQ33794.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
     
0.515
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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