node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ34469.1 | nusA | NB311A_12027 | NB311A_08473 | Hypothetical protein; COG0250 Transcription antiterminator. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.948 |
EAQ34469.1 | rho | NB311A_12027 | NB311A_08048 | Hypothetical protein; COG0250 Transcription antiterminator. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.900 |
EAQ34469.1 | rplE | NB311A_12027 | NB311A_01005 | Hypothetical protein; COG0250 Transcription antiterminator. | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.887 |
EAQ34469.1 | rplN | NB311A_12027 | NB311A_01015 | Hypothetical protein; COG0250 Transcription antiterminator. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.888 |
EAQ34469.1 | rpoB | NB311A_12027 | NB311A_01130 | Hypothetical protein; COG0250 Transcription antiterminator. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
EAQ34469.1 | rpoC | NB311A_12027 | NB311A_01125 | Hypothetical protein; COG0250 Transcription antiterminator. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.940 |
EAQ34469.1 | rpsC | NB311A_12027 | NB311A_01035 | Hypothetical protein; COG0250 Transcription antiterminator. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.954 |
EAQ34469.1 | rpsG | NB311A_12027 | NB311A_01085 | Hypothetical protein; COG0250 Transcription antiterminator. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.888 |
EAQ34469.1 | rpsH | NB311A_12027 | NB311A_00995 | Hypothetical protein; COG0250 Transcription antiterminator. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.889 |
EAQ34469.1 | rpsJ | NB311A_12027 | NB311A_01070 | Hypothetical protein; COG0250 Transcription antiterminator. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.952 |
nusA | EAQ34469.1 | NB311A_08473 | NB311A_12027 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Hypothetical protein; COG0250 Transcription antiterminator. | 0.948 |
nusA | rho | NB311A_08473 | NB311A_08048 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.967 |
nusA | rplE | NB311A_08473 | NB311A_01005 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.977 |
nusA | rplN | NB311A_08473 | NB311A_01015 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.972 |
nusA | rpoB | NB311A_08473 | NB311A_01130 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
nusA | rpoC | NB311A_08473 | NB311A_01125 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
nusA | rpsC | NB311A_08473 | NB311A_01035 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.981 |
nusA | rpsG | NB311A_08473 | NB311A_01085 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.989 |
nusA | rpsH | NB311A_08473 | NB311A_00995 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.980 |
nusA | rpsJ | NB311A_08473 | NB311A_01070 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.990 |