STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ35685.1COG0642 Signal transduction histidine kinase. (536 aa)    
Predicted Functional Partners:
EAQ34597.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.988
EAQ34779.1
Two component diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 0.982
EAQ34873.1
COG0642 Signal transduction histidine kinase.
 
 0.979
EAQ36248.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
 
 0.975
EAQ36975.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 0.970
EAQ34780.1
Response regulator receiver; COG0784 FOG: CheY-like receiver.
 
 
 0.962
EAQ37067.1
COG0642 Signal transduction histidine kinase.
 
 
0.856
EAQ34884.1
COG0642 Signal transduction histidine kinase.
 
0.851
EAQ36251.1
COG0642 Signal transduction histidine kinase.
 
  0.848
EAQ33671.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
 
 0.843
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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