STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ34794.1Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter. (415 aa)    
Predicted Functional Partners:
EAQ34378.1
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.949
EAQ33968.1
COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.942
EAQ33962.1
COG2181 Nitrate reductase gamma subunit.
 
 
 0.936
EAQ33964.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.912
EAQ33965.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.911
EAQ34946.1
COG1140 Nitrate reductase beta subunit.
 
 
 0.911
EAQ33963.1
COG2180 Nitrate reductase delta subunit.
 
  
 0.835
EAQ37357.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.800
EAQ36231.1
BFD-like (2Fe-2S)-binding region protein; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.694
EAQ36232.1
Rieske (2Fe-2S) region protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
 
 0.664
Your Current Organism:
Nitrobacter sp. Nb311A
NCBI taxonomy Id: 314253
Other names: N. sp. Nb-311A, Nitrobacter sp. Nb 311A, Nitrobacter sp. Nb-311A
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