STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89193.1Adenine specific DNA methyltransferase, D12 class; COG0338 Site-specific DNA methylase. (276 aa)    
Predicted Functional Partners:
EAP89160.1
Prophage LambdaW1, terminase large subunit, putative; COG5525 Bacteriophage tail assembly protein.
 
  
 0.664
EAP89163.1
Portal protein; COG5511 Bacteriophage capsid protein.
  
   
 0.601
EAP89166.1
Hypothetical protein.
  
     0.499
EAP89158.1
ParB-like nuclease; COG1475 Predicted transcriptional regulators.
  
  
 0.414
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.