STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89281.1Scaffolding protein for murein-synthesizing holoenzyme putativeoutermembrane protein; COG3713 Outer membrane protein V. (262 aa)    
Predicted Functional Partners:
EAP89397.1
Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
     0.749
EAP89282.1
Hypothetical protein.
       0.719
EAP89280.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.677
EAP89239.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.662
EAP91017.1
Hypothetical protein; COG2171 Tetrahydrodipicolinate N-succinyltransferase.
  
     0.607
EAP90788.1
Methyltransferase; COG0500 SAM-dependent methyltransferases.
  
     0.556
EAP90376.1
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.504
EAP90569.1
Hypothetical protein; COG1509 Lysine 2,3-aminomutase.
  
     0.501
EAP91405.1
Hypothetical protein; COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain.
  
     0.490
EAP89062.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.483
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.