STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88923.1enoyl-CoA hydratase/isomerase family protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. (265 aa)    
Predicted Functional Partners:
EAP90463.1
3-hydroxy-3-methylglutarate-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
  0.950
EAP88918.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
  0.914
EAP88925.1
Putative acyl-CoA carboxylase alpha chain protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
  0.914
EAP90326.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
   
 0.910
EAP90374.1
Two-component system sensor protein; COG0591 Na+/proline symporter.
   
 0.908
EAP90711.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
    
  0.906
EAP91464.1
Cell cycle histidine kinase CckA; COG0642 Signal transduction histidine kinase.
    
  0.857
EAP91561.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
    
  0.857
EAP89820.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
    
  0.857
EAP89821.1
PAS; COG0642 Signal transduction histidine kinase.
    
  0.857
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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