STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88691.1Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family. (529 aa)    
Predicted Functional Partners:
EAP88690.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
      0.956
EAP88692.1
UvrD/REP helicase; COG0210 Superfamily I DNA and RNA helicases.
 
   
 0.950
EAP90303.1
Hypothetical protein.
  
    0.632
EAP88688.1
Hypothetical protein.
 
     0.457
EAP88689.1
Hypothetical protein.
 
     0.448
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.