STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89783.1COG4338 Uncharacterized protein conserved in bacteria. (52 aa)    
Predicted Functional Partners:
EAP89784.1
COG3011 Uncharacterized protein conserved in bacteria.
       0.773
EAP89785.1
Probable deoxyribodipyrimidine photolyase; COG3380 Predicted NAD/FAD-dependent oxidoreductase.
 
     0.645
EAP89782.1
Hypothetical protein.
       0.481
EAP90264.1
Hypothetical protein.
 
     0.469
EAP89786.1
Putative membrane protein (DNA-damage-inducible protein); COG0534 Na+-driven multidrug efflux pump.
       0.467
EAP90944.1
COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
     0.409
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.