EAP89930.1 protein (Oceanicaulis sp. HTCC2633)

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Score

EAP89930.1

S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). (94 aa)

Predicted Functional Partners:

rpmB

0.957

rplS

0.949

rplQ

0.930

rplM

0.927

rplN

0.927

rplV

0.926

rplD

0.925

rpmG

0.924

rpmF

0.924

rplO

0.924

Your Current Organism:

Oceanicaulis sp. HTCC2633

NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAP89930.1	rplD	OA2633_06949	OA2633_03661	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.925
EAP89930.1	rplM	OA2633_06949	OA2633_02061	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.927
EAP89930.1	rplN	OA2633_06949	OA2633_03616	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.927
EAP89930.1	rplO	OA2633_06949	OA2633_03571	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	Probable 50s ribosomal protein l15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.924
EAP89930.1	rplQ	OA2633_06949	OA2633_03536	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	COG0203 Ribosomal protein L17.	0.930
EAP89930.1	rplS	OA2633_06949	OA2633_09424	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.949
EAP89930.1	rplV	OA2633_06949	OA2633_03641	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.926
EAP89930.1	rpmB	OA2633_06949	OA2633_06934	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.957
EAP89930.1	rpmF	OA2633_06949	OA2633_02611	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.924
EAP89930.1	rpmG	OA2633_06949	OA2633_01339	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.924
rplD	EAP89930.1	OA2633_03661	OA2633_06949	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).	0.925
rplD	rplM	OA2633_03661	OA2633_02061	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplD	rplN	OA2633_03661	OA2633_03616	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplD	rplO	OA2633_03661	OA2633_03571	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Probable 50s ribosomal protein l15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplD	rplQ	OA2633_03661	OA2633_03536	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0203 Ribosomal protein L17.	0.998
rplD	rplS	OA2633_03661	OA2633_09424	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
rplD	rplV	OA2633_03661	OA2633_03641	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
rplD	rpmB	OA2633_03661	OA2633_06934	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.995
rplD	rpmF	OA2633_03661	OA2633_02611	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.994
rplD	rpmG	OA2633_03661	OA2633_01339	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996