STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP90145.1GGDEF family protein; COG2199 FOG: GGDEF domain. (203 aa)    
Predicted Functional Partners:
EAP89004.1
GGDEF family protein; COG2200 FOG: EAL domain.
 
 0.967
EAP90711.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 
 0.960
EAP90326.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
  
 0.957
EAP90710.1
PleD-like protein; COG2202 FOG: PAS/PAC domain.
 0.954
EAP90995.1
COG0642 Signal transduction histidine kinase.
  
 0.946
EAP90354.1
Two-component hybrid sensor and regulator; COG2203 FOG: GAF domain.
  
 0.915
EAP90523.1
Putative phosphodiesterase; COG2200 FOG: EAL domain.
 
 0.870
EAP88710.1
Hypothetical protein; COG2200 FOG: EAL domain.
 
 
 0.868
EAP90374.1
Two-component system sensor protein; COG0591 Na+/proline symporter.
  
 0.844
EAP90647.1
Hypothetical protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
0.811
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.