STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89338.1Hypothetical protein; COG5639 Uncharacterized conserved small protein. (86 aa)    
Predicted Functional Partners:
EAP89339.1
COG2948 Type IV secretory pathway, VirB10 components.
 
   
 0.956
EAP89341.1
Conjugal transfer protein; COG3701 Type IV secretory pathway, TrbF components.
 
     0.955
EAP89342.1
Putative conjugal transfer protein TrbL; COG3846 Type IV secretory pathway, TrbL components.
 
     0.955
EAP89344.1
COG5314 Conjugal transfer/entry exclusion protein.
 
     0.955
EAP89340.1
Conjugal transfer protein; COG3504 Type IV secretory pathway, VirB9 components.
 
     0.954
EAP89346.1
Probable conjugal transfer protein; COG5268 Type IV secretory pathway, TrbD component.
 
     0.954
EAP89345.1
Conjugal transfer protein trbE; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.952
EAP89347.1
Conjugal transfer protein trbc; COG3838 Type IV secretory pathway, VirB2 components (pilins).
 
     0.950
EAP89348.1
Conjugal transfer protein trbB; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
     0.914
EAP89349.1
Hypothetical protein.
 
     0.883
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.