STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89340.1Conjugal transfer protein; COG3504 Type IV secretory pathway, VirB9 components. (345 aa)    
Predicted Functional Partners:
EAP89339.1
COG2948 Type IV secretory pathway, VirB10 components.
 0.999
EAP89345.1
Conjugal transfer protein trbE; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.998
EAP89341.1
Conjugal transfer protein; COG3701 Type IV secretory pathway, TrbF components.
  
 0.992
EAP89342.1
Putative conjugal transfer protein TrbL; COG3846 Type IV secretory pathway, TrbL components.
 
  
 0.991
EAP89344.1
COG5314 Conjugal transfer/entry exclusion protein.
 
  
 0.991
EAP89347.1
Conjugal transfer protein trbc; COG3838 Type IV secretory pathway, VirB2 components (pilins).
 
  
 0.991
EAP89346.1
Probable conjugal transfer protein; COG5268 Type IV secretory pathway, TrbD component.
 
  
 0.989
EAP89348.1
Conjugal transfer protein trbB; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.989
EAP89338.1
Hypothetical protein; COG5639 Uncharacterized conserved small protein.
 
     0.954
EAP89350.1
Plasmid transfer factor, traG protein; COG3505 Type IV secretory pathway, VirD4 components.
   
 0.942
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.