STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89389.1COG2861 Uncharacterized protein conserved in bacteria. (405 aa)    
Predicted Functional Partners:
rppH
MutT/nudix family protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
       0.779
EAP91475.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.760
EAP90651.1
COG3847 Flp pilus assembly protein, pilin Flp.
  
     0.743
EAP90652.1
COG4961 Flp pilus assembly protein TadG.
  
     0.742
EAP90653.1
COG4964 Flp pilus assembly protein, secretin CpaC.
  
     0.738
EAP88796.1
Hypothetical protein; COG1561 Uncharacterized stress-induced protein.
  
     0.736
EAP91487.1
Flagellar P-ring protein precursor.
  
     0.726
EAP91476.1
Hypothetical protein.
  
     0.719
EAP91300.1
Hypothetical protein.
  
     0.713
EAP88879.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.