STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89397.1Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (403 aa)    
Predicted Functional Partners:
EAP89281.1
Scaffolding protein for murein-synthesizing holoenzyme putativeoutermembrane protein; COG3713 Outer membrane protein V.
  
     0.749
EAP90788.1
Methyltransferase; COG0500 SAM-dependent methyltransferases.
  
     0.666
EAP89501.1
Recombination protein F; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
     0.575
EAP90569.1
Hypothetical protein; COG1509 Lysine 2,3-aminomutase.
  
     0.575
EAP90516.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.566
EAP89239.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.548
EAP90517.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.545
EAP89280.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.515
EAP91521.1
Putative permease.
  
     0.499
EAP89575.1
Hep_Hag family protein; COG5295 Autotransporter adhesin.
  
     0.481
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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