STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89501.1Recombination protein F; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (263 aa)    
Predicted Functional Partners:
EAP91094.1
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
     0.735
EAP89554.1
Hypothetical protein.
  
     0.721
EAP91647.1
Probable aggregation factor core protein MAFp3, isoform C; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.704
EAP90338.1
Glycosyl hydrolase, BNR repeat.
  
     0.703
EAP91529.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.652
EAP89718.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
  
     0.650
EAP90492.1
COG1266 Predicted metal-dependent membrane protease.
  
     0.628
EAP90445.1
Hypothetical protein; COG3591 V8-like Glu-specific endopeptidase.
  
     0.621
EAP90434.1
Hypothetical protein.
  
     0.608
EAP89973.1
Hypothetical protein; COG3137 Putative salt-induced outer membrane protein.
  
     0.593
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.