STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88779.1COG1309 Transcriptional regulator. (193 aa)    
Predicted Functional Partners:
EAP88780.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.533
EAP90833.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
  
     0.527
EAP88781.1
Hypothetical protein; COG0841 Cation/multidrug efflux pump.
       0.427
EAP88782.1
COG1538 Outer membrane protein.
       0.427
EAP90972.1
Possible transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
  
     0.423
EAP90326.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
    
 
 0.420
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.