STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP90416.1Putative lipoprotein; COG2931 RTX toxins and related Ca2+-binding proteins. (972 aa)    
Predicted Functional Partners:
EAP90417.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.897
bamD
Competence lipoprotein ComL, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.846
EAP91381.1
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
 
 0.838
bamA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.831
EAP89944.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.758
EAP89943.1
Putative tonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.755
EAP89120.1
COG0457 FOG: TPR repeat.
  
    0.678
EAP89115.1
MotA/TolQ/ExbB proton channel family protein; COG1196 Chromosome segregation ATPases.
  
     0.646
EAP90418.1
General secretion pathway protein C; COG3031 Type II secretory pathway, component PulC.
 
   
 0.639
EAP90540.1
Oar-like outer membrane protein protein, OmpA family protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.625
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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