STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP90427.1Hypothetical general secretion pathway protein L; COG3297 Type II secretory pathway, component PulL. (428 aa)    
Predicted Functional Partners:
EAP90428.1
Hypothetical protein; COG3149 Type II secretory pathway, component PulM.
 
 
 0.994
EAP90420.1
Type II secretory pathway ATPase; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.967
EAP90425.1
General secretion pathway protein J; COG4795 Type II secretory pathway, component PulJ.
 
   
 0.963
EAP90426.1
General secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
 
  
 0.961
EAP90424.1
Hypothetical protein.
 
  
 0.957
EAP90418.1
General secretion pathway protein C; COG3031 Type II secretory pathway, component PulC.
 
   
 0.936
EAP90419.1
General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD.
 
  
 0.886
EAP90422.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.878
EAP91274.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.875
EAP90066.1
Probable type II secretion protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.875
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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