Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP90577.1 | EAP90579.1 | OA2633_12770 | OA2633_12780 | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | Hypothetical protein. | 0.661 |
EAP90577.1 | EAP91389.1 | OA2633_12770 | OA2633_04406 | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.570 |
EAP90577.1 | def | OA2633_12770 | OA2633_12775 | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.535 |
EAP90579.1 | EAP90577.1 | OA2633_12780 | OA2633_12770 | Hypothetical protein. | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | 0.661 |
EAP90579.1 | def | OA2633_12780 | OA2633_12775 | Hypothetical protein. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.773 |
EAP91389.1 | EAP90577.1 | OA2633_04406 | OA2633_12770 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | 0.570 |
def | EAP90577.1 | OA2633_12775 | OA2633_12770 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein; COG2819 Predicted hydrolase of the alpha/beta superfamily. | 0.535 |
def | EAP90579.1 | OA2633_12775 | OA2633_12780 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.773 |