STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP90655.1COG4960 Flp pilus assembly protein, protease CpaA. (172 aa)    
Predicted Functional Partners:
EAP90656.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.969
EAP90659.1
Pilus assembly protein CpaE; COG0784 FOG: CheY-like receiver.
 
  
 0.955
EAP90661.1
COG4965 Flp pilus assembly protein TadB.
 
  
 0.943
EAP90654.1
Hypothetical protein.
 
  
 0.936
EAP90657.1
COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.928
EAP90658.1
Pilus assembly protein CpaD.
 
     0.906
EAP90653.1
COG4964 Flp pilus assembly protein, secretin CpaC.
 
  
 0.884
EAP90662.1
COG2064 Flp pilus assembly protein TadC.
 
   
 0.881
EAP90652.1
COG4961 Flp pilus assembly protein TadG.
 
  
 0.877
EAP90651.1
COG3847 Flp pilus assembly protein, pilin Flp.
 
  
 0.842
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.