STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP89116.1COG0811 Biopolymer transport proteins. (173 aa)    
Predicted Functional Partners:
EAP89117.1
COG0848 Biopolymer transport protein.
 
 
 0.987
EAP89118.1
COG0848 Biopolymer transport protein.
 
 
 0.983
EAP89119.1
Hypothetical tonB2 protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
   0.969
EAP89114.1
TonB system biopolymer transport component.
 
    0.939
EAP89115.1
MotA/TolQ/ExbB proton channel family protein; COG1196 Chromosome segregation ATPases.
    
0.930
EAP89121.1
TonB protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
   0.911
EAP89120.1
COG0457 FOG: TPR repeat.
 
     0.890
EAP89829.1
TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.866
EAP90015.1
TonB system transport protein, ExbD/TolR family protein; COG0848 Biopolymer transport protein.
 
 
 0.794
EAP88663.1
Energy transducer; Uptake of iron, cyanocobalimin; sensitivity to phages, colicins; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
   0.751
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.