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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50847.1Response regulator; COG0784 FOG: CheY-like receiver. (133 aa)    
Predicted Functional Partners:
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
   
 0.885
EAR50849.1
COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.813
EAR49852.1
Sensor histidine kinase, putative; COG2202 FOG: PAS/PAC domain.
 
     0.769
EAR50092.1
Sensor histidine kinase, putative; COG2202 FOG: PAS/PAC domain.
  
  
  0.760
EAR51850.1
Putative two-component system sensor kinase; COG3920 Signal transduction histidine kinase.
 
     0.672
EAR52495.1
COG0642 Signal transduction histidine kinase.
 
     0.659
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
 
   
 0.617
EAR50850.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
    
  0.584
EAR50435.1
Hypothetical protein; COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
   
 0.541
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.513
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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