STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49491.1Ser/Thr protein phosphatase family protein; COG1692 Uncharacterized protein conserved in bacteria. (262 aa)    
Predicted Functional Partners:
EAR49492.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.855
EAR49493.1
trkA domain protein; COG0471 Di- and tricarboxylate transporters.
       0.855
folD
folD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
      0.715
EAR49494.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
    0.569
EAR49490.1
Carbon monoxide dehydrogenase operon G protein.
       0.528
EAR53103.1
Hypothetical protein; COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination.
  
     0.432
EAR49489.1
Multidrug efflux pump, Major Facilitator Superfamily protein (MFS); COG0477 Permeases of the major facilitator superfamily.
       0.418
EAR49497.1
Hypothetical protein.
  
    0.412
EAR49495.1
Hypothetical protein.
       0.407
EAR49496.1
Hypothetical protein.
       0.407
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.