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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52641.1Regulatory protein GntR, HTH; COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. (347 aa)    
Predicted Functional Partners:
EAR52642.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.832
EAR52649.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
 
     0.831
EAR49912.1
Hypothetical protein; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.737
EAR52643.1
Proline dipeptidase; COG0006 Xaa-Pro aminopeptidase.
 
     0.715
EAR52646.1
Succinate dehydrogenase subunit; COG3608 Predicted deacylase.
 
     0.656
EAR52724.1
Hypothetical oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.571
EAR51095.1
Putative extracellular solute-binding lipoprotein; COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.551
cobB-2
COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.533
EAR52644.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.504
EAR52645.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.504
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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