close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52657.1Putative saccharide deacetylase; Similar to NodB protein; COG0726 Predicted xylanase/chitin deacetylase. (270 aa)    
Predicted Functional Partners:
EAR52658.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.773
EAR52659.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.773
EAR52660.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
       0.773
EAR52184.1
Hypothetical protein; COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
  
 
  0.644
EAR49558.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.644
EAR49995.1
Hypothetical protein.
  
 
  0.644
EAR49998.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
 
  0.644
EAR50274.1
Putative beta-(1-3)-glucosyl transferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
 
  0.644
EAR52653.1
ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.605
EAR52654.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.605
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.