STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52679.1COG3180 Putative ammonia monooxygenase. (368 aa)    
Predicted Functional Partners:
EAR52680.1
COG2079 Uncharacterized protein involved in propionate catabolism.
 
     0.848
EAR52678.1
COG2079 Uncharacterized protein involved in propionate catabolism.
 
     0.746
EAR52677.1
COG0473 Isocitrate/isopropylmalate dehydrogenase.
 
     0.727
EAR52681.1
Rhodanese domain protein/cystathionine beta-lyase; COG0607 Rhodanese-related sulfurtransferase.
 
     0.710
EAR52683.1
MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism.
 
     0.624
EAR52682.1
Hypothetical protein; COG0730 Predicted permeases.
       0.541
EAR52676.1
Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators.
       0.443
EAR51304.1
TctB protein.
  
    0.435
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.