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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52689.1Methylcitrate dehydratase; COG2079 Uncharacterized protein involved in propionate catabolism. (499 aa)    
Predicted Functional Partners:
EAR51519.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.974
EAR50579.1
Hypothetical protein; COG2513 PEP phosphonomutase and related enzymes.
 
  
 0.810
EAR52688.1
COG3333 Uncharacterized protein conserved in bacteria.
       0.775
EAR52687.1
Hypothetical protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component.
       0.705
EAR51621.1
COG1396 Predicted transcriptional regulators.
 
  
 0.634
EAR52686.1
COG3181 Uncharacterized protein conserved in bacteria.
       0.617
EAR52685.1
COG2079 Uncharacterized protein involved in propionate catabolism.
 
  
  0.583
EAR50903.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
  0.567
EAR52101.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.567
EAR52223.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.538
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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