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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52699.1Hypothetical protein; COG1228 Imidazolonepropionase and related amidohydrolases. (390 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.929
hutH
COG2986 Histidine ammonia-lyase.
  
  
 0.902
EAR52698.1
TRAP-T family transporter, DctP (periplasmic binding) subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.877
EAR52700.1
Hydrolase, isochorismatase family protein; COG1335 Amidases related to nicotinamidase.
 
     0.859
EAR52697.1
TRAP-T family transporter, DctQ (4 TMs) subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.841
EAR52695.1
COG1309 Transcriptional regulator.
 
     0.813
EAR52351.1
COG3741 N-formylglutamate amidohydrolase.
  
  
 0.730
EAR50705.1
Hypothetical protein; COG3741 N-formylglutamate amidohydrolase.
  
  
 0.730
EAR52696.1
TRAP-T family transporter, DctM (12 TMs) subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
     0.570
EAR50577.1
Hypothetical protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
 
 0.534
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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