close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52712.1Putative transcriptional regulatory protein; COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain. (324 aa)    
Predicted Functional Partners:
EAR51804.1
COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.
  
     0.775
EAR52709.1
Putative sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.773
EAR52710.1
COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
EAR52711.1
Putative sugar ABC transporter permease protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
EAR52704.1
Putative transketolase alpha subunit protein; COG3959 Transketolase, N-terminal subunit.
 
     0.691
EAR52713.1
Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.678
EAR51944.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
  
    0.671
EAR52708.1
Putative lipoprotein; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
       0.664
EAR52703.1
COG3958 Transketolase, C-terminal subunit.
 
     0.641
EAR52702.1
Ribulose-bisphosphate carboxylase-like protein; COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit.
 
     0.624
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.