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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52727.1ABC transporter substrate-binding protein - oligopeptide transport; COG0747 ABC-type dipeptide transport system, periplasmic component. (540 aa)    
Predicted Functional Partners:
EAR52728.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.884
EAR52729.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.858
EAR52724.1
Hypothetical oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
     0.827
EAR52733.1
Putative dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
     0.725
EAR52671.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
  0.665
EAR50438.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
  0.665
EAR52730.1
Oligopeptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.664
EAR52731.1
Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.663
EAR51838.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
     0.637
EAR52732.1
N-acetylneuraminate lyase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
     0.582
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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