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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52738.1Hypothetical protein; COG3386 Gluconolactonase. (285 aa)    
Predicted Functional Partners:
rplQ
COG0203 Ribosomal protein L17.
 
      0.745
EAR52442.1
Putative dihydroxy-acid dehydratase protein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
  
  0.658
ilvD
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
    
  0.599
EAR51825.1
Sugar ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.558
EAR52737.1
COG1414 Transcriptional regulator.
       0.553
EAR52142.1
Probable transmembrane protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 
  0.545
EAR52535.1
Hypothetical protein; COG3386 Gluconolactonase.
  
  
  0.504
EAR52380.1
Hypothetical protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
     0.453
EAR52735.1
Polyketide synthase, putative; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.449
EAR52736.1
COG0498 Threonine synthase.
       0.416
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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