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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52750.1Hypothetical protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (327 aa)    
Predicted Functional Partners:
EAR52752.1
Hypothetical protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.996
EAR52639.1
Putative iron(III) ABC transporter, fused inner membrane subunits; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.985
EAR52751.1
Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.896
EAR49689.1
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
0.880
thiP
Thiamin ABC transporter membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.833
EAR50410.1
Iron ABC transporter, ATP-binding protein, putative; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.710
EAR50233.1
Putative spermidine/putrescine transport atp-binding abc transporter protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.709
EAR50960.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.656
EAR51703.1
ABC transporter ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.656
EAR51710.1
Sulfate ABC transporter, ATP-binding protein; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.656
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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