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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52751.1Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (362 aa)    
Predicted Functional Partners:
EAR52752.1
Hypothetical protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
  0.976
EAR52750.1
Hypothetical protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
 0.896
EAR51709.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.896
EAR50962.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.894
EAR50234.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.882
EAR52147.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
 
     
0.872
EAR50961.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.865
EAR50235.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.863
EAR51708.1
Hypothetical protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
  0.823
EAR50320.1
ABC polyamine/opine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.818
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.