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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52762.1Hypothetical protein; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes. (151 aa)    
Predicted Functional Partners:
EAR52761.1
Hypothetical protein.
       0.817
EAR52636.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.658
EAR52760.1
Putative inner membrane or exported protein.
 
     0.604
EAR50531.1
Hypothetical protein; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases.
  
     0.553
EAR49566.1
COG4991 Uncharacterized protein with a bacterial SH3 domain homologue.
  
     0.535
EAR52763.1
RarD; COG2962 Predicted permeases.
       0.515
EAR52498.1
Response regulator receiver protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.495
EAR52759.1
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.493
EAR49693.1
Hypothetical protein.
  
     0.493
EAR49695.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.493
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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