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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52768.1COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (424 aa)    
Predicted Functional Partners:
EAR52765.1
Branched-chain amino acid ABC transporter, ATP-binding protein, putative; COG4674 Uncharacterized ABC-type transport system, ATPase component.
 
  
 0.998
EAR52766.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
EAR52767.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.998
EAR52764.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.994
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.802
EAR52183.1
Putative salicylate hydroxylase (Salicylate 1-monooxygenase); COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
    0.772
EAR49401.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
   
 
  0.767
EAR51165.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
   
 
  0.758
EAR52589.1
COG0307 Riboflavin synthase alpha chain.
   
    0.746
rpmJ
COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.740
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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