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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51534.1COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC. (113 aa)    
Predicted Functional Partners:
EAR51535.1
COG1276 Putative copper export protein.
 
  
 0.970
EAR52524.1
COG2847 Uncharacterized protein conserved in bacteria.
  
    0.887
EAR51532.1
COG3019 Predicted metal-binding protein.
 
     0.870
EAR51533.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.814
EAR52291.1
Putative sarcosine oxidase, alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
    
   0.745
EAR50673.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
    
   0.745
EAR49539.1
Putative NADH-dependent oxidase protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
    
   0.745
EAR51970.1
Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
    
   0.745
EAR51536.1
COG2132 Putative multicopper oxidases.
 
   
 0.710
EAR51538.1
Cytochrome c, class I.
    
   0.622
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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