STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51538.1Cytochrome c, class I. (82 aa)    
Predicted Functional Partners:
EAR49614.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 
 0.889
EAR51537.1
COG0728 Uncharacterized membrane protein, putative virulence factor.
 
     0.797
EAR49539.1
Putative NADH-dependent oxidase protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.776
EAR52291.1
Putative sarcosine oxidase, alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
   
  0.757
EAR50673.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
   
  0.757
EAR51970.1
Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
   
  0.757
EAR51534.1
COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
    
   0.622
EAR49612.1
Hypothetical protein.
 
     0.608
EAR51781.1
FAD linked oxidase-like; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.566
EAR51539.1
COG2217 Cation transport ATPase.
       0.479
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.