STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51539.1COG2217 Cation transport ATPase. (756 aa)    
Predicted Functional Partners:
EAR51348.1
COG2217 Cation transport ATPase.
 
 
0.961
EAR49695.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
   
  0.954
EAR51551.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
 
 0.936
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 
 0.899
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.881
EAR51536.1
COG2132 Putative multicopper oxidases.
 
  
 0.759
EAR52102.1
Response regulator/sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
  0.753
EAR51540.1
COG1937 Uncharacterized protein conserved in bacteria.
  
  
 0.703
EAR52541.1
Putative trehalose synthase; COG0366 Glycosidases.
   
 
  0.691
EAR52925.1
Putative ABC transporter, fused inner membrane subunits; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.673
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.